3D-PSSM Fold Recognition
Combines sequence and structural information for predicting the structure and/or function of your protein sequence, and can detect remote homologies beyond PSI-Blast.
BioInfoBank Meta Server
The BioInfoBank Meta Server offers a gateway to well-benchmarked protein structure and function prediction methods. Structural models collected from the predictions servers are ass…
ELM - Functional Sites in Proteins
Predicts functional sites (linear motifs) in proteins, such as post-translational modification sites, ligand motifs, and targeting signals. Context-based rules and logical filters …
InterPro - The Integrated Resource of Protein Domains and Functional Sites.
A database built from Pfam, PRINTS and PROSITE.
Melanie II 2-D Analysis Software
Powerful, state-of-the-art, 2-D analysis software package with user-friendly interface from the Swiss Institute of Bioinformatics.
PDB Ligand Environment
Ligand search engine to EBI Macromolecule Structure Database. Provides PDB ID codes with further visualization and statistics charts.
PFP: Automated Function Prediction Server
Accepts a single query protein sequence and returns the most probable Gene Ontology functional annotations in each of the three ontologies.
Protein Structure Prediction Server (PSIPRED)
3D protein structure prediction from amino acid sequence. Includes MEMSAT for transmembrane topology prediction, GenTHREADER and mGenTHREADER for fold recognition.
Quaternary Structure Prediction
An experimental bioinformatics server. Classifies protein sequences as homodimers or non-homodimers. Applications: metabolic reconstruction, protein structure and function assignme…
Swiss-Pdb Viewer
User-friendly interface allowing analysis of several proteins at once, including superimposition to deduce structural alignments, and compare active sites. From GlaxoWellcome Exper…
SWISS-PROT + TrEMBL
The SWISS-PROT database contains high-quality annotation, is non-redundant and cross-referenced to many other databases. SWISS-PROT is accompanied by TrEMBL, a computer-annotated s…
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