4 links
HMM library for all proteins of known structure
supfam.mrc-lmb.cam.ac.uk
This is a server for structural superfamily assignments to protein sequences using Hidden Markov Models. The services included are: -homology searching -alignments -genome assi…
Interactive Blast Query
aridolan.com
Utility for online manipulation of Blast results. Results organized in a table format.
Sequence Alignment and Modeling System
cse.ucsc.edu
Implementation of hidden Markov models for sequence analysis. Free UNIX software for nonprofit groups, and sequences can be submitted online.